PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07560
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 142aa    MW: 15525.4 Da    PI: 10.8216
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07560genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.5e-105322048
                     TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48
                     G ++W++Ia++++ gRt++++k++w ++l
         EMT07560  5 GERRWSLIASHLP-GRTDNEIKNYWKSHL 32
                     6679*********.***********9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.364136IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.1E-13532IPR009057Homeodomain-like
SuperFamilySSF466892.65E-8535IPR009057Homeodomain-like
CDDcd001671.44E-9532No hitNo description
PfamPF002492.5E-8532IPR001005SANT/Myb domain
PfamPF066401.2E-45285IPR010588Myb-related protein P, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MATGGERRWS LIASHLPGRT DNEIKNYWKS HLSRQFHGLW RMYTDSNNIT KTVDMNKLFA  60
TRKRRGGRAP GQSPRSNMKK QPVPGATKAQ DGSSPIGATS SASSVPQGDP DQDKATNNII  120
VSNTSGENCI KDGIWPGPVL SF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558096.14e-39PREDICTED: myb-related protein P-like
TrEMBLM8B1U61e-102M8B1U6_AEGTA; Myb-related protein P
STRINGMLOC_57220.11e-39(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.12e-16myb domain protein 12